Results for 'cell cycle constraints'

990 found
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  1.  18
    Introns and gene expression: Cellular constraints, transcriptional regulation, and evolutionary consequences.Patricia Heyn, Alex T. Kalinka, Pavel Tomancak & Karla M. Neugebauer - 2015 - Bioessays 37 (2):148-154.
    A gene's “expression profile” denotes the number of transcripts present relative to all other transcripts. The overall rate of transcript production is determined by transcription and RNA processing rates. While the speed of elongating RNA polymerase II has been characterized for many different genes and organisms, gene‐architectural features – primarily the number and length of exons and introns – have recently emerged as important regulatory players. Several new studies indicate that rapidly cycling cells constrain gene‐architecture toward short genes with a (...)
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  2.  39
    Cells need safety valves.Antoine Danchin - 2009 - Bioessays 31 (7):769-773.
    In Escherichia coli, the role of lacA, the third gene of the lactose operon, has remained an enigma. I suggest that its role is the consequence of the need for cells to have safety valves that protect them from the osmotic effect created by their permeases. Safety valves allow them to cope with the buildup of osmotic pressure under accidental transient conditions. Multidrug resistance (MDR) efflux, thus named because of our anthropocentrism, is ubiquitous. Yet, the formation of simple leaks would (...)
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  3.  11
    The cell cycle and differentiation as integrated processes: Cyclins and CDKs reciprocally regulate Sox and Notch to balance stem cell maintenance.Jonas Muhr & Daniel W. Hagey - 2021 - Bioessays 43 (7):2000285.
    Development and maintenance of diverse organ systems require context‐specific regulation of stem cell behaviour. We hypothesize that this is achieved via reciprocal regulation between the cell cycle machinery and differentiation factors. This idea is supported by the parallel evolutionary emergence of differentiation pathways, cell cycle components and complex multicellularity. In addition, the activities of different cell cycle phases have been found to bias cells towards stem cell maintenance or differentiation. Finally, several direct (...)
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  4.  29
    CellCycle‐Dependent Regulation of Cell Adhesions: Adhering to the Schedule.Yitong Li & Keith Burridge - 2019 - Bioessays 41 (1):1800165.
    Focal adhesions disassemble during mitosis, but surprisingly little is known about how these structures respond to other phases of the cell cycle. Three recent papers reveal unexpected results as they examine adhesions through the cell cycle. A biphasic response is detected where focal adhesions grow during S phase before disassembly begins early in G2. In M phase, activated integrins at the tips of retraction fibers anchor mitotic cells, but these adhesions lack the defining components of focal (...)
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  5.  15
    Cell Cycle Synchronization of the Murine EO771 Cell Line Using Double Thymidine Block Treatment.Marie Goepp, Delphine Le Guennec, Adrien Rossary & Marie-Paule Vasson - 2020 - Bioessays 42 (9):1900116.
    This study shows that double thymidine block treatment efficiently arrests the EO771 cells in the S‐phase without altering cell growth or survival. A long‐term analysis of cell behavior, using 5(6)‐carboxyfluorescein diacetate N‐succinimidyl ester (CFSE) staining, show synchronization to be stable and consistent over time. The EO771 cell line is a medullary breast‐adenocarcinoma cell line isolated from a spontaneous murine mammary tumor, and can be used to generate murine tumor implantation models. Different biological (serum or amino acid (...)
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  6.  31
    Transformations in null mutants of hox genes: Do they represent intercalary regenerates?Michael Crawford - 1995 - Bioessays 17 (12):1065-1073.
    In the minds of many, Hox gene null mutant phenotypes have confirmed the direct role that these genes play in specifying the pattern of vertebrate embryos. The genes are envisaged as defining discrete spatial domains and, subsequently, conferring specific segmental identities on cells undergoing differentiation along the antero‐posterior axis. However, several aspects of the observed mutant phenotypes are inconsistent with this view. These include: the appearance of other, unexpected transformations along the dorsal axis; the occurrence of mirror‐image duplications; and the (...)
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  7.  36
    CellCycle‐Dependent Regulation of Translation: New Interpretations of Old Observations in Light of New Approaches.Silje Anda & Beáta Grallert - 2019 - Bioessays 41 (8):1900022.
    It is a long-standing view that global translation varies during the cell cycle and is much lower in mitosis than in other cell-cycle phases. However, the central papers in the literature are not in agreement about the extent of downregulation in mitosis, ranging from a dramatic decrease to only a marginal reduction. Herein, it is argued that the discrepancy derives from technical challenges. Cell-cycle-dependent variations are most conveniently studied in synchronized cells, but the synchronization (...)
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  8.  42
    Cell cycle checkpoints: Arresting progress in mitosis.Gary J. Gorbsky - 1997 - Bioessays 19 (3):193-197.
    Cell cycle arrest in M phase can be induced by the failure of a single chromosome to attach properly to the mitotic spindle. The same cell cycle checkpoint mediates M phase arrest when cells are treated with drugs that either disrupt or hyperstabilize spindle microtubules. Study of yeast mutants that fail to arrest in the presence of microtubule disruptors identified a set of genes important in this checkpoint pathway. Two recent papers report the cloning of human (...)
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  9.  31
    Non‐Cell Cycle Functions of the CDK Network in Ciliogenesis: Recycling the Cell Cycle Oscillator.Liliana Krasinska & Daniel Fisher - 2018 - Bioessays 40 (6):1800016.
    Cyclin‐dependent kinases are Ser/Thr protein kinases best known for their cell cycle roles, where CDK1 triggers mitotic onset in all eukaryotes. CDKs are also involved in various other cellular processes, some of which, such as transcription and centrosome duplication, are coupled to cell cycle progression. A new study suggests that the mitotic CDK network is active at low levels in non‐dividing, differentiating precursors of multiciliated cells, and that it drives ciliogenesis. Manipulating the activity of CDK1 or (...)
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  10.  29
    Integrating Evolution and Development: From Theory to Practice.Roger Sansom & Robert N. Brandon (eds.) - 2007 - MIT Press.
    Embryos, cells, genes, and organisms : reflections on the history of evolutionary developmental biology / Manfred D. Laubichler and Jane Maienschein The organismic systems approach : streamlining the naturalistic agenda / Werner Callebaut, Gerd B. Müller, and Stuart A. Newman Complex traits : genetics, development, and evolution / H. Frederik Nijhout Functional and developmental constraints on life-cycle evolution : an attempt on the architecture of constraints / Gerhard Schlosser Legacies of adaptive development / Roger Sansom Evo-devo meets (...)
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  11.  10
    The cell cycle in growth and development: a special issue.Adam S. Wilkins - 1995 - Bioessays: News and Reviews in Molecular, Cellular and Developmental Biology 17 (6):469-470.
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  12.  30
    Cell cycle control by oscillating regulatory proteins in Caulobacter crescentus.Julia Holtzendorff, Jens Reinhardt & Patrick H. Viollier - 2006 - Bioessays 28 (4):355-361.
    Significant strides have been made in recent years towards understanding the molecular basis of cell cycle progression in the model bacterium Caulobacter crescentus. At the heart of cell cycle regulation is a multicomponent transcriptional feedback loop, governing the production of successive regulatory waves or pulses of at least three master regulatory proteins. These oscillating master regulators direct the execution of phase‐specific events and, importantly, through intrinsic genetic switches not only determine the length of a given phase, (...)
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  13.  31
    The dynamics of cell cycle regulation.John J. Tyson, Attila Csikasz-Nagy & Bela Novak - 2002 - Bioessays 24 (12):1095-1109.
    Major events of the cell cycle—DNA synthesis, mitosis and cell division—are regulated by a complex network of protein interactions that control the activities of cyclin‐dependent kinases. The network can be modeled by a set of nonlinear differential equations and its behavior predicted by numerical simulation. Computer simulations are necessary for detailed quantitative comparisons between theory and experiment, but they give little insight into the qualitative dynamics of the control system and how molecular interactions determine the fundamental physiological (...)
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  14.  44
    A new cell cycle checkpoint that senses plasma membrane/cell wall damage in budding yeast.Keiko Kono & Amy E. Ikui - 2017 - Bioessays 39 (4):1600210.
    In nature, cells face a variety of stresses that cause physical damage to the plasma membrane and cell wall. It is well established that evolutionarily conserved cell cycle checkpoints monitor various cellular perturbations, including DNA damage and spindle misalignment. However, the ability of these cell cycle checkpoints to sense a damaged plasma membrane/cell wall is poorly understood. To the best of our knowledge, our recent paper described the first example of such a checkpoint, using (...)
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  15.  20
    Cellcycle‐regulatory elements and the control of cell differentiation in the budding yeast.Curt Wittenberg & Roberto La Valle - 2003 - Bioessays 25 (9):856-867.
    The stable differentiation of cells into other cell types typically involves dramatic reorganization of cellular structures and functions. This often includes remodeling of the cell cycle and the apparatus that controls it. Here we review our understanding of the role and regulation of cell cycle control elements during cell differentiation in the yeast, Saccharomyces cerevisiae. Although the process of differentiation may be more overtly obvious in metazoan organisms, those systems are by nature more difficult (...)
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  16.  31
    Integrin control of cell cycle: a new role for ubiquitin ligase.Qing Qiu Pu & Charles H. Streuli - 2002 - Bioessays 24 (1):17-21.
    Receptor tyrosine kinases and integrins are activated by growth factors and extracellular matrix, respectively. Their activation leads to signal transduction cascades that control many aspects of cell phenotype, including progression through the G1 phase of the cell cycle. However, the signalling cassettes driven by growth factors and matrix do not work independently of each other. Integrin triggering is essential to facilitate kinase‐ and GTPase‐mediated signals and thereby drive efficient transfer of information through the growth factor–cyclin axis. A (...)
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  17.  23
    Cell cycle checkpoints, DNA repair and DNA replication strategies.C. Stephen Downes & Adam S. Wilkins - 1994 - Bioessays 16 (1):75-79.
  18.  10
    Cell cycle control in the Drosophila wing.Marco Milán - 1998 - Bioessays 20 (12):969-971.
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  19.  26
    (1 other version)An elementary approach to cell cycle analysis.C. Wiedemann & H. A. Moser - 1988 - Acta Biotheoretica 37 (2):205-236.
    An elementary semistochastic model for cell cycle analysis is presented. Various independently generated experimental data sets are compared with the theory in which for the first time, a consistent consideration of non-proliferating cells has also been taken into account.
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  20.  14
    Cell growth and the cell cycle: New insights about persistent questions.Jan Inge Øvrebø, Yiqin Ma & Bruce A. Edgar - 2022 - Bioessays 44 (11):2200150.
    Before a cell divides into two daughter cells, it typically doubles not only its DNA, but also its mass. Numerous studies in cells ranging from yeast to mammals have shown that cellular growth, stimulated by nutrients and/or growth factor signaling, is a prerequisite for cell cycle progression in most types of cells. The textbook view of growth‐regulated cell cycles is that growth signaling activates the transcription of G1 Cyclin genes to induce cell proliferation, and also (...)
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  21.  28
    Histone H4, the cell cycle and A question of integrity.Bryan M. Turner - 1995 - Bioessays 17 (12):1013-1015.
    The N‐terminal domain of histone H4 has been implicated in various nuclear functions, including gene silencing and activation and replication‐linked chromatin assembly. Many of these have been identified by using H4 mutants in the yeast S. cerevisiae. In a recent paper, Megee et al.(1) use this approach to show that mutants in which all four N‐terminal H4 lysines are substituted with glutamines accumulate increased levels of DNA damage. A single lysine, but not an arginine, anywhere in the N‐terminal domain suppresses (...)
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  22.  7
    An autonomous cellcycle oscillator involved in the coordination of G1 events.Marc R. Roussel - 2000 - Bioessays 22 (1):3-5.
    In early embryonic development, the cell cycle is paced by a biochemical oscillator involving cyclins and cyclin-dependent kinases (cdks). Essentially the same machinery operates in all eukaryotic cells, although after the first few divisions various braking mechanisms (the so-called checkpoints) become significant. Haase and Reed have recently shown that yeast cells have a second, independent oscillator which coordinates some of the events of the G1 phase of the cell cycle.(1) Although the biochemical nature of this oscillator (...)
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  23.  21
    CHRONOCRISIS: When Cell Cycle Asynchrony Generates DNA Damage in Polyploid Cells.Simon Gemble & Renata Basto - 2020 - Bioessays 42 (10):2000105.
    Polyploid cells contain multiple copies of all chromosomes. Polyploidization can be developmentally programmed to sustain tissue barrier function or to increase metabolic potential and cell size. Programmed polyploidy is normally associated with terminal differentiation and poor proliferation capacity. Conversely, non‐programmed polyploidy can give rise to cells that retain the ability to proliferate. This can fuel rapid genome rearrangements and lead to diseases like cancer. Here, the mechanisms that generate polyploidy are reviewed and the possible challenges upon polyploid cell (...)
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  24.  20
    DNA damage and cell cycle regulation of ribonucleotide reductase.Stephen J. Elledge, Zheng Zhou, James B. Allen & Tony A. Navas - 1993 - Bioessays 15 (5):333-339.
    Ribonucleotide reductase (RNR) catalyzes the rate limiting step in the production of deoxyribonucleotides needed for DNA synthesis. In addition to the well documented allosteric regulation, the synthesis of the enzyme is also tightly regulated at the level of transcription. mRNAs for both subunits are cell cycle regulated and inducible by DNA damage in all organisms examined, including E. coli, S. cerevisiae and H. sapiens. This DNA damage regulation is thought to provide a metabolic state that facilitates DNA replicational (...)
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  25.  8
    Cell cycle regulators control stemness and differentiation.Ylva Engström - 2021 - Bioessays 43 (7):2100123.
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  26.  33
    Distinguishing between stochasticity and determinism: Examples from cell cycle duration variability.Sivan Pearl Mizrahi, Oded Sandler, Laura Lande-Diner, Nathalie Q. Balaban & Itamar Simon - 2016 - Bioessays 38 (1):8-13.
    We describe a recent approach for distinguishing between stochastic and deterministic sources of variability, focusing on the mammalian cell cycle. Variability between cells is often attributed to stochastic noise, although it may be generated by deterministic components. Interestingly, lineage information can be used to distinguish between variability and determinism. Analysis of correlations within a lineage of the mammalian cell cycle duration revealed its deterministic nature. Here, we discuss the sources of such variability and the possibility that (...)
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  27.  71
    Flexibility and utility of the Cell Cycle Ontology.Vladimir Mironov, Erick Zimar Antezana San Roman, Mikel Egaña, Ward Blondé, Bernard De Baets, Martin Kuiper & Robert Stevens - 2011 - Applied ontology 6 (3):247-261.
    The Cell Cycle Ontology (CCO) has the aim to provide a 'one stop shop' for scientists interested in the biology of the cell cycle that would like to ask questions from a molecular and/or systems perspective: what are the genes, proteins, and so on involved in the regulation of cell division? How do they interact to produce the effects observed in the regulation of the cell cycle? To answer these questions, the CCO must (...)
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  28.  19
    Cell cycle checkpoints and cell surface damage.Marnie Johansson & Duncan J. Clarke - 2022 - Bioessays 44 (7):2200079.
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  29.  21
    Cell cycle co‐ordination after too much rum.Antony M. Carr - 1994 - Bioessays 16 (5):309-312.
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  30.  18
    Oncogenes and cell cycle genes.Sergio Ferrari & Renato Baserga - 1987 - Bioessays 7 (1):9-13.
    The relationships between oncogenes, cellcycle control genes, and growth‐related genes are described. An important generalization from the data is that all the oncogenes and cellcycle control genes so far characterized appear to be genes for growth factors or for receptors to growth factors, or to be involved in the general metabolism and structure of the cell. It is suggested that the transition in cell growth from quiescence to the proliferative state, in early G1, may (...)
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  31.  13
    Cell cycle control and plant morphogenesis: is there an essential link?Adriana S. Hemerly, Paulo C. G. Ferreira, Marc Van Montagu & Dirk Inzé - 1999 - Bioessays 21 (1):29-37.
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  32.  23
    Evidence for a cell cycle checkpoint that senses branched actin in the lamellipodium.Irene Dang & Alexis Gautreau - 2012 - Bioessays 34 (12):1021-1024.
    Graphical AbstractRecent evidence indicates that branched actin might control cell progression through G1 in addition to lamellipodium protrusion.
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  33.  33
    Cyclin‐dependent protein kinases: Key regulators of the eukaryotic cell cycle.Erich A. Nigg - 1995 - Bioessays 17 (6):471-480.
    Passage through the cell cycle requires the successive activation of different cyclin‐dependent protein kinases (CDKs). These enzymes are controlled by transient associations with cyclin regulatory subunits, binding of inhibitory polypeptides and reversible phosphorylation reactions. To promote progression towards DNA replication, CDK/cyclin complexes phosphorylate proteins required for the activation of genes involved in DNA synthesis, as well as components of the DNA replication machinery. Subsequently, a different set of CDK/cyclin complexes triggers the phosphorylation of numerous proteins to promote the (...)
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  34. The Ran-GTPase and cell-cycle control.Jonathan D. Moore - 2001 - Bioessays 23 (1):77-85.
  35.  22
    The electric fence to cell-cycle progression: Do local changes in membrane potential facilitate disassembly of the primary cilium?Diana Urrego, Araceli Sánchez, Adam P. Tomczak & Luis A. Pardo - 2017 - Bioessays 39 (6):1600190.
    Kv10.1 is a voltage‐gated potassium channel relevant for tumor biology, but the underlying mechanism is still unclear. We propose that Kv10.1 plays a role coordinating primary cilium disassembly with cell cycle progression through localized changes of membrane potential at the ciliary base. Most non‐dividing cells display a primary cilium, an antenna‐like structure important for cell physiology. The cilium is disassembled when the cell divides, which requires an increase of Ca2+ concentration and a redistribution of phospholipids in (...)
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  36.  3
    Uncoupling growth from the cell cycle.Laura A. Johnston - 1998 - Bioessays 20 (4):283-286.
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  37. Flexibility and utility of the cell cycle ontology.Vladimir Mironov, Erick Antezana, Mikel Egaña, Ward Blondé, Bernard De Baets, Martin Kuiper & Robert Stevens - 2011 - Applied ontology 6 (3):247-261.
    The Cell Cycle Ontology (CCO) has the aim to provide a ‘one stop shop’ for scientists interested in the biology of the cell cycle that would like to ask questions from a molecular and/or systems pe...
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  38.  23
    A conserved eukaryotic cell cycle control.Emma Warbrick & Peter A. Fantes - 1988 - Bioessays 8 (6):202-204.
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  39.  16
    Cycle‐regulated genes and cell cycle regulation.Richard D'Ari - 2001 - Bioessays 23 (7):563-565.
    The transcriptional profile of the entire Caulobacter crescentus genome over a synchronous cell cycle was recently described.(1) The analysis reveals a stunning 553 cell-cycle-regulated genes or orfs, nearly 19% of the genome, including putative functions in virtually all biological activities. Over a quarter of these genes/orfs respond to the Caulobacter master regulator, CtrA, most of them apparently indirectly. The analysis confirms and extends earlier observations showing that many proteins involved in cell cycle functions are (...)
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  40.  15
    Dynamic organisation of intermediate filaments and associated proteins during the cell cycle.Roland Foisner - 1997 - Bioessays 19 (4):297-305.
    Intermediate filaments, which form the structural framework of both the cytoskeleton and the nuclear lamina in most eukaryotic cells, have been found to be highly dynamic structures. A continuous exchange of subunit proteins at the filament surface and a stabilisation of soluble subunits by chaperone‐type proteins may modulate filament structure and plasticity. Recent studies on the cell cycle‐dependent interaction of intermediate filaments with associated proteins, and a detailed analysis of intermediate filament phosphorylation in defined subcellular locations at various (...)
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  41.  19
    On G0 and Cell Cycle Controls.D. A. Gilbert - 1988 - Bioessays 9 (4):135-136.
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  42.  31
    Block to DNA replication in meiotic maturation: a unified view for a robust arrest of cell cycle in oocytes and somatic cells.Yumiko Kubota & Haruhiko Takisawa - 2003 - Bioessays 25 (4):313-316.
    Under certain conditions, the cell cycle can be arrested for a long period of time. Vertebrate oocytes are arrested at G2 phase, while somatic cells arrest at G0 phase. In both cells, nuclei have lost the ability to initiate DNA synthesis. In a pair of recently published papers,1,2 Méchali and colleagues and Coué and colleagues have clarified how frog oocytes prevent untimely DNA synthesis during the long G2 arrest. Intriguingly, they found only Cdc6 is responsible for the inability (...)
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  43.  24
    The role of MCM proteins in the cell cycle control of genome duplication.Stephen E. Kearsey, Domenico Maiorano, Eddie C. Holmes & Ivan T. Todorov - 1996 - Bioessays 18 (3):183-190.
    The regulatory mechanism which ensures that eukaryotic chromosomes replicate precisely once per cell cycle is a basic and essential cellular property of eukaryotes. This fundamental aspect of DNA replication is still poorly understood, but recent advances encourage the view that we may soon have a clearer picture of how this regulation is achieved. This review will discuss in particular the role of proteins in the minichromosome maintenance (MCM) family, which may hold the key to understanding how DNA is (...)
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  44.  7
    Integrating the MAP kinase signal into the G1 phase cell cycle machinery.Kristin Roovers & Richard K. Assoian - 2000 - Bioessays 22 (9):818-826.
    Growth factors and the extracellular matrix provide the environmental cues that control the proliferation of most cell types. The binding of growth factors and matrix proteins to receptor tyrosine kinases and integrins, respectively, regulates several cytoplasmic signal transduction cascades, among which activation of the mitogen-activated protein kinase cascade, ras → Raf → MEK → ERK, is perhaps the best characterized. Curiously, ERK activation has been associated with both stimulation and inhibition of cell proliferation. In this review, we summarize (...)
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  45. On g0 and cell-cycle controls-comment.P. Fantes - 1987 - Bioessays 7 (5):222-223.
     
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  46.  4
    The Anti‐G0 Manifesto: Should a problematic construct (G0) with no biological reality be removed from the cell cycle? Yes! [REVIEW]Stephen Cooper - 2021 - Bioessays 43 (3):2000270.
    It is widely accepted that there exists a “resting” or “quiescent” state where a growing cell leaves the cell cycle to enter what is often called the “G0‐phase.” I propose that there is no biological reality to the “G0‐phase.” The experimental basis for proposing a G0‐phase is re‐examined and re‐analyzed here showing that the G0‐phase is an anthropomorphic construct with no biological reality.
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  47.  15
    The cell cycle: A superior overview. The biology of cell reproduction. By Renato Baserga Harvard University Press, 1985. pp. 251. £19.95. [REVIEW]J. M. Mitchison - 1986 - Bioessays 5 (4):186-187.
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  48.  22
    Reversible histone modification and the chromosome cell cycle.E. Morton Bradbury - 1992 - Bioessays 14 (1):9-16.
    During the eukaryotic cell cycle, chromosomes undergo large structural transitions and spatial rearrangements that are associated with the major cell functions of genome replication, transcription and chromosome condensation to metaphase chromosomes. Eukaryotic cells have evolved cell cycle dependent processes that modulate histone:DNA interactions in chromosomes. These are; (i) acetylations of lysines; (ii) phosphorylations of serines and threonines and (iii) ubiquitinations of lysines. All of these reversible modifications are contained in the well‐defined very basic N‐ and (...)
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  49.  11
    Drosophila development pulls the strings of the cell cycle.Bruce H. Reed - 1995 - Bioessays 17 (6):553-556.
    The three cycles of cell division immediately following theformation of the cellular blastoderm during Drosophila embryogenesis display an invariant pattern(1,2). Bursts of transcription of a gene called string are required and sufficient to trigger mitosis at this time during development(3). The activator of mitosis encoded by the string gene is a positive regulator of cdc2 kinase and a Drosophila homologue of the Saccharomyces pombe cdc25 tyrosine phosphatase(4,5). Evidence presented in a recent paper(6) demonstrates that transcription of string, and hence (...)
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  50.  25
    On G 0 and cell cycle controls.Stephen Cooper & Peter Fantes - 1987 - Bioessays 7 (5):220-223.
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