The goal of this article is to show that formal analysis and reconstructions may be useful to discuss and shed light on substantive meta-theoretical issues. We proceed here by exemplification, analysing and reconstructing as a case study a paradigmatic biochemical theory, the Monod-Wyman-Changeux theory of allosterism, and applying the reconstruction to the discussion of some issues raised by prominent representatives of the new mechanist philosophy. We conclude that our study shows that at least in this case mechanicism and more traditional (...) accounts are not rivals but complementary approaches. (shrink)

In recent times, the exponential growth of sequenced genomes and structural knowledge of proteins, as well as the development of computational tools and controlled vocabularies to deal with this growth, has fueled a demand for conceptual clarification regarding the concept of function in molecular biology. In this article, we will attempt to develop an account of function fit to deal with the conceptual/philosophical problems in that domain, but which can be extended to other areas of biology. To provide this account, (...) we will argue for three theses: (1) some authors have confused metatheoretical issues (about the meaning and application criteria of terms) with metaphysical ones (about teleology); this led them to (2) look for explicit definitions of “function”, in terms of necessary and sufficient criteria of application, in order to make the concept of function eliminable; however, (3) if one leaves metaphysical worries aside and focuses on functional attribution practices, it is more adequate to say that the concept of function has an open texture. That is, that a multiplicity of application criteria is available, none of which is sufficient nor necessary to attribute a function to a trait, and which only in concert form a clear picture. We distinguish this thesis from some usual forms of pluralism. Finally, we will illustrate this account with a historical reconstruction of the ascription of a water transport function to aquaporins. (shrink)

Los científicos suelen diferenciar entre teorías científicas explicativas y descriptivas. Para poder dar cuenta de esta diferencia es necesario contar con un análisis riguroso de las teorías científicas y la concepción estructuralista es una herramienta metateórica de análisis capaz de brindar los elementos metateóricos requeridos para abordar este tipo de estudios. El objetivo del presente trabajo es analizar una teoría que trata de dar cuenta de la actividad cooperativa de las proteínas, la teoría de Hill (tanto la originalmente publicada como (...) la presentada en los libros de texto) con el fin de elucidar el concepto de explicación utilizado en este caso. Usually, scientists differentiate between explanatory and descriptive scientific theories. To be able to analyze this difference is necessary to provide a rigorous analysis of scientific theories - the structuralist point of view is a metatheoretic tool capable of offering the metatheoretic elements needed for this. The aim of the present work is to analyze Hill's theory (both as originally published and as presented in textbooks), a theory about the cooperative activity of the proteins, in order to elucidate the concept of explanation used in it. (shrink)

El objetivo del presente trabajo es presentar los primeros pasos de una reconstrucción estructuralista de la teoría alostérica MWC. Esta teoría fue presentada en dos artículos publicados en Journal of Molecular Biology, en el primero de ellos “Allosteric proteins and cellular control systems”, de 1963, una versión simplificada, y en el segundo, “On the nature of allosteric transitions: a plausible model”, publicado en la misma revista en 1965, una versión más acabada. En estos trabajos, el ganador del premio Nobel en (...) Fisiología, Jacques Monod, introduce por primera vez un nuevo concepto que revolucionará la bioquímica y biología de la época: el alosterismo. (shrink)